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What You Always Wanted to Know About Course
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What You Always Wanted to Know About E. coli O157:H7 Infection
OUTLINE
COURSE OBJECTIVES
After completing this course the participant will be able to:
A. INTRODUCTION
The Centers for Disease Control and Prevention (CDC) in
Atlanta, Georgia estimates that 76 million Americans become ill, 300,000 are
hospitalized, and 5,000 people die from foodborne illnesses each year (2). According
to the CDC’s data, 24% of foodborne disease outbreaks are caused by bacteria,
5.4% by chemicals, 0.7% by parasites, 4.2% by viruses, and 68% are of unknown
etiology (2). The most commonly reported bacterial agents of foodborne infections
are, Campylobacter, Salmonella, Clostridium perfringens,
and E. coli O157:H7 (2).
First described in 1982 after a foodborne outbreak involving
undercooked hamburgers, E. coli O157:H7 is now recognized as a significant
cause of foodborne and waterborne illness in the industrialized world (2). Each
year, E. coli O157:H7 and other Shigella toxin-producing E.
coli (STEC) strains cause an estimated 73,000 cases of hemorrhagic colitis
and 60 deaths in the United States (likely an underestimate because many laboratories
do not routinely include selective media for this organism, as this course will
describe). As many as 8-18% of victims with E. coli O157:H7 infection—particularly
young children or the elderly—go on to develop a disease called hemolytic
uremic syndrome (HUS) (1,5,6). These patients may require kidney dialysis, transfusions
or transplant, and some are left with chronic renal failure and neurological
damage. Three to 5% of patients with HUS die (5,6).
Over 100 serotypes of E. coli produce Shigella
toxins, and over 50 serotypes have been associated with hemorrhagic colitis
or HUS (4). In the United States, E. coli O157:H7 is the most frequently isolated
E. coli producing Shigella toxin (Shiga-toxin E. coli or STEC),
but increasingly other non-O157 STEC organisms are being identified as causes
of outbreaks and sporadic illness. Because most current laboratory methods for
the detection of O157 STEC do not also detect non-O157 STEC, the incidence of
documented non-O157 infections is undetermined (1,3, 4).
In some countries, non-O157 STEC serotype strains are more commonly isolated,
although most outbreaks and most cases of HUS are attributed to O157 STEC. In
Europe and Australia, non-O157 serotypes predominate, especially 0111:H, 026,
and 0103:H5, among others.
Clinical laboratories play a key role in the detection and
surveillance of outbreaks. To protect the public health, it is critical that
clinical laboratories are able to identify or rule out pathogens like E.
coli O157:H7 during outbreaks. However, surveys have shown that laboratories
vary widely in their stool culture protocol and in their ability to reliably
isolate and correctly identify this organism (1,5,6). In some geographic areas
and age groups in the United States, the rate of isolation of E. coli
O157 from fecal specimens equals that of Campylobacter and exceeds
that of Salmonella and Shigella.
This distance learning course will review some of the history
of E. coli O157:H7 infection, where the isolates are found, how the
organism is spread, the clinical symptoms of the disease, how the organism is
isolated and identified by the clinical laboratory, and some steps people can
take to reduce the risk of infection.
B. HISTORY OF E. COLI O157:H7 INFECTION
Since the infection was first described in 1982, there have
been many reports of E. coli O157:H7 outbreaks throughout the world
(2). However, as previously mentioned, E. coli infection in other parts
of the world may also be due to other serotypes. Generally, the E. coli
O157:H7 outbreaks or outbreaks due to other serotypes of E. coli have
been related to contaminated meat (particularly ground beef), water, unpasteurized
juice, lettuce, spinach, and green onions. Outbreaks of E. coli O157:H7
have also been widespread due to person-to-person transmission. The illness
spreads easily from person to person because a small number of organisms can
cause sickness (the infectious dose is low—as few as 10-100 bacterial
cells can cause sickness) (5,6).
Although there has been a lot of recent press about E. coli O157:H7
recovered from spinach and lettuce, you should be aware that this is not a new
problem. There have been many large and a few unusual food or waterborne outbreaks
due to E. coli O157:H7 since the organism was first reported in 1982.
There are many outbreaks of E. coli O157:H7 each year of which the
public is not aware. The CDC estimates there are more than 80 E. coli outbreaks
traceable to produce each year, with an average of 43 people sickened in each
outbreak (2).
Listed below are only some of the most notable or unusual E. coli O157:H7
outbreaks in the last twenty years, just to give you a sense of the incidence
of E. coli O157:H7 infection:
C. TRANSMISSION OF E. COLI O157:H7
Animals are responsible for many outbreaks of E. coli
O157:H7 in humans. E. coli O157:H7 is part of the normal bacterial
intestinal flora of healthy dairy and beef cattle, sheep, pigs, deer, wild
boars, and a few other animals. Generally, the organism is transmitted to
humans from animal feces in irrigation water or fresh drinking water, or from
animal fertilizer spread directly onto the field where food is growing. Meat
can become contaminated during slaughter, and organisms can be accidentally
mixed into meat when it is ground. E. coli can be present on a cow’s
udders or on milking equipment and therefore may get into raw milk. The organism
is also commonly found in petting zoos, where E. coli O157:H7 can
easily contaminate the ground, railings, feed bins, and fur of the animals.
Ground beef has caused more E. coli O157 outbreaks
than any other vehicle of transmission. In particular, eating ground beef
that has not been cooked sufficiently (to an internal temperature of 155°
F) to kill E. coli O157 can cause infection. Contamination is not
always easy to prevent or to detect because contaminated meat looks and smells
normal. In addition, the number of organisms required to cause disease is
very small; 10 to 100 organisms is sufficient to induce infection (1,5,6).
Beef processing is the most common point of contamination. If the infected
parts are ground, the bacteria go from the surface of the cut to the interior.
Ground beef, therefore, is more likely to be a source of infection than steak.
Additionally, in the production of ground beef, meat from multiple cows is
often ground together, enabling contamination from a single cow to infect
an entire lot of ground beef. Other meat products, such as salami or other
sausage, rare roast beef and meat jerky have also been associated with E.
coli O157:H7 infection.
Another main source of E. coli O157:H7 is farm
produce and contaminated water. The organism is transmitted to humans via
consumption of contaminated sprouts (alfalfa and radish), lettuce, spinach
and other raw vegetables, unpasteurized milk and juice, and by swimming in
or drinking sewage-contaminated water. Generally, animal feces have contaminated
the water source or contaminated the fields during crop irrigation. Usually
the contamination occurs while the crops are in the fields prior to packaging.
Fresh fruits and vegetables can be contaminated if they are washed or irrigated
with water that is contaminated with animal manure. Alfalfa sprouts and other
raw sprouts pose a particular challenge, as the conditions under which they
are sprouted are ideal for growing microbes, and because they are eaten without
further cooking. Unpasteurized fruit juice can be contaminated if E. coli
O157 is in or on the fruit that is used to make it.
Human-to-human contact is also an efficient means of E.
coli O157:H7 transmission. The infective dose is so low, from 10 to 100
bacterial cells that outbreaks spread readily in schools, long-term care institutions,
families, and day care facilities. Bacteria in the loose stool of infected
persons can be passed easily from one person to another if hygiene or hand
washing habits are poor after going to the toilet. E. coli can be
spread to playmates by toddlers who are not toilet trained or by adults who
do not wash their hands carefully after changing diapers. Family members,
visitors, staff, and playmates of infected children or adults are at high
risk of becoming infected themselves. Young children typically shed the organism
in their feces for a week or two after their illness resolves and they no
longer have symptoms.
In the 1980’s, outbreaks of E. coli O157:H7
were associated primarily with fast-food restaurants and undercooked hamburger
meat. Recently, infections have more often been associated with a variety
of uncooked food, contaminated water sources, and person-to-person spread,
which are all important vehicles of transmission.
D. ILLNESS/SYMPTOMS
Human illness typically follows consumption of food or
water that has been contaminated with animal feces, or contact with a contaminated
person and dissemination by the fecal-oral route. People generally become
ill from E. coli O157:H7 two to eight days (average of 3-4) after
the organism enters the body through the gastrointestinal tract. E. coli
infection can initially cause watery diarrhea that may progress to a
severe and bloody diarrhea and painful abdominal cramps, along with nausea
and sometimes vomiting, but generally without much fever.
Bloody diarrhea (called hemorrhagic colitis or HC) and
abdominal pain are the most common signs of E. coli illness. In about
15% of cases of E. coli O157:H7 infection, symptoms are severe enough
that people seek medical attention primarily due to their bloody diarrhea
and severe abdominal cramps. Rarely, an E. coli O157:H7 can cause
non-bloody diarrhea or no symptoms.
In most cases the E. coli illness completely
resolves in 5 to 10 days. However, some people, particularly children under
5 and the elderly, can become very sick from E. coli O157:H7 and
progress to a complication called hemolytic uremic syndrome (HUS) several
weeks after the initial symptoms. Without hospital care, HUS patients can
die.
E. HEMOLYTIC UREMIC SYNDROME (HUS)
Although most people recover from an E. coli
O157:H7 bacterial infection, about 8-18% of infected individuals go on to
develop a disease called hemolytic uremic syndrome (HUS), a severe, potentially
life-threatening complication in which red blood cells are destroyed and the
kidneys fail. In the United States, HUS is the principal cause of acute kidney
failure in children. E. coli O157:H7 is believed to cause at least
80% of cases of HUS in North America.
Hemolytic uremic syndrome is described by three central
features: destruction of red blood cells (hemolytic anemia), destruction of
platelets (thrombocytopenia), and acute renal failure.
HUS develops when the toxin from Shiga toxin producing
E. coli, known as Shiga-like toxin (SLT), enters the circulation
and binds to special receptors in the human body. These Shiga-toxin receptors
are heterogeneously distributed in the major body organs and allow different
symptoms in different HUS victims, although the greatest receptor concentration
appears to be in the kidneys, especially in children. As the binding process
and the resulting inflammatory process accelerate, red blood cells are destroyed
and cellular debris aggregates within the microvasculature in the body, further
destroying the body’s inherent clot dissolving mechanisms. The result
is formation of microthrombi (small clots) within a particularly susceptible
organ, such as the kidney. Currently, no intervention exists to halt the progression
of HUS, and doctors are left to support the HUS victim while the acute process
runs its course.
Some organs appear more susceptible than others to the
damage caused by Shiga-like toxins, possibly due to the presence of increased
numbers of toxin-receptors. These organs include the kidney, liver, pancreas
and brain. The essential pathogenic process is the same regardless of the
organ affected: microthrombi are formed causing tissue damage or death, and
platelets are destroyed leading to bleeding. HUS is an extremely complex process
that researchers are still trying to fully explain.
Hemolytic uremic syndrome is usually treated in an intensive
care unit and requires blood transfusions, and often kidney dialysis. Those
who develop HUS often suffer more long-term consequences. One-third of those
who have had HUS have abnormal kidney function many years later, and a few
require long-term dialysis. Another 8% of this group develop other lifelong
complications, such as high blood pressure, seizures, blindness, and paralysis.
With intensive care, the death rate for hemolytic uremic syndrome is 3-5%
(1,6), or about 61 deaths annually in the US.
It is very difficult to predict the severity and course
of HUS once it initiates. Several studies have demonstrated that children
with HUS who have apparently recovered will develop hypertension, urinary
abnormalities and/or renal insufficiency during long-term follow-up.
F. MICROBIOLOGY OF E. COLI O157:H7
E. coli O157:H7 is one of over 100 serotypes
of E. coli that can produce one or more toxins. Over 50 different
serotypes of E. coli have been associated with hemorrhagic colitis
or HUS, although generally the other serotypes cause a less severe illness
than does E. coli O157:H7. Toxin producing E. coli serotypes
are members of a class of pathogenic E. coli known as enterohemorrhagic
E. coli, or EHEC.
The nomenclature for the serotypes of E. coli and
the toxins they produce is confusing. Often the toxins produced by these organisms
are referred to in the literature as Shiga toxin (ST), Shiga-like toxins (SLT),
and verotoxins (VT), which are basically the same. Verotoxin (VT) is the general
description of a class of toxins that have a cytopathic effect on Vero cells
(African Green Monkey kidney cells). Sometimes the E. coli (EC) strains
that produce these toxins are referred to by their toxin producing capabilities,
such as verotoxin producing E. coli (VTEC), or Shiga-like toxin producing
E. coli (STEC). Most current literature, however, recommends that
strains of E. coli that produce these toxins be called “Shiga
toxin-producing” E. coli (STEC) to help reduce confusion.
Recent research suggests that E. coli O157:H7
acquired its toxin production characteristic when a bacteriophage (a virus
that infects bacteria) transmitted genetic material for the development of
this toxin from a closely related Shigella bacterial species (hence the epithet,
Shiga-like toxin) into a formerly benign species of E. coli.
E. coli O157:H7 causes disease primarily through
elaboration of one or more Shiga toxins: Stx 1, Stx 2, Stx 2c, and Stx 2e.
Two distinct Shiga toxins, Stx 1 and Stx 2, have been extensively studied.
Stx 1 is similar to the Shiga toxin produced by Shigella dysenteriae serotype
01 and is neutralized by antiserum to this toxin. The Stx 1 toxin produced
by O157 STEC and other STEC serotypes are virtually identical. Stx 2, first
demonstrated in strains of E. coli O157, is not neutralized by the
antiserum to the Shiga toxin. Typically, strains of E. coli O157
produce mainly Stx 2 toxin alone, but some produce Stx 1 and Stx 2 in combination.
Which toxin or toxins the E. coli is capable of producing is determined
by genes encoded on the genome of the bacteriophage obtained from Shigella
dysenteriae 01. The production of Stx toxin, or the genes encoding Stx toxin
can be detected by a variety of biological, immunologic, or nucleic acid-based
assays that are discussed in another section.
The Shiga-like toxins are protein structures comprising
two subunits, A and B. The A sub-unit of the toxin is the major virulence
factor and is associated with producing an irreversible inhibition of protein
synthesis in human cells. The B sub-unit is a receptor unit which binds to
glycolipids on human cell surfaces. The major glycolipid receptor for Shigella-toxin
is globotriaosylceramide, a compound that is found on endothelial cells and
on blood vessels, including glomerular capillaries.
Research supports the fact that hemorrhagic colitis and
HUS likely result from the action of these toxins on vascular endothelium.
The toxins from E. coli O157:H7 enter the circulation and bind to
special receptors, particularly on the vascular endothelium. The binding process
initially disrupts the blood vessels of the intestines, leading to bloody
diarrhea, and then later disrupts other sites with receptors (such as kidney,
brain and other organs), leading to micro-clots. The micro-clots cause tissue
damage and may lead to renal failure and/or other organ failure.
It is believed that other virulence factors, such as adhesion,
intimin (an attaching protein), and other cytolysins, may also be important
for the full pathogenicity of Shiga-toxin producing E. coli O157
strains. Attachment of the organism to the gastrointestinal epithelium by
either outer membrane proteins or fimbriae on the exterior of E. coli
O157:H7 has been reported to be an important virulence factor. It is
assumed that the direct attachment of the organism to the gastrointestinal
epithelium permits immediate contact with hemolytic enzymes and other toxins,
although many of these other potential virulence factors of E. coli O157:H7
have not yet been established.
G. ISOLATION AND IDENTIFICATION
Proper isolation and identification of E. coli
O157:H7 requires several steps discussed below: collection and transport,
selective plating media, biochemical identification, serotyping, and toxin
detection. Molecular identification methods are described briefly in this
section but are beyond the scope of this course.
Collection and Transport A diagnosis of E. coli O157:H7
infection can be made by recovering the organism in a patient’s stool
sample. The stool sample must be fresh and processed immediately or stored
appropriately as discussed below.
Bloody or liquid stools from patients should be collected
early in the course of illness (usually collected with 6 days of onset), when
the causative agent is likely to be present in the largest numbers and is
likely to be recovered. Fecal specimens collected from ill persons may not
yield a pathogen if they are collected at an inappropriate time (beyond six
days of onset), or are collected or handled inappropriately. The CDC and others
have published detailed recommendations for collection of stool specimens
associated with gastroenteritis outbreaks (2,3,4).
Stool specimens require special attention to both collection
and transportation to ensure isolation of the causative organism. Generally,
a fresh stool sample or rectal swabs from potentially infected patients suspected
of having gastroenteritis is collected in a container, or placed into an appropriate
transport medium (Cary-Blair, Stuart’s, or Amies) before being submitted
to the clinical laboratory. Instruct the patient to pass liquid or bloody
stool into a clean, leak-proof wide mouth container.
Ideally, a stool specimen should be processed immediately—within
one hour of collection—or the specimen can be refrigerated at 4°
C and examined within 1-2 hours. If the laboratory cannot process the specimen
within 2 hours of collection, the specimen should be placed in a transport
medium. Cary-Blair is probably the best overall transport medium for diarrheal
stools. Bag and seal the transported specimen.
Specimens in a transport medium at room temperature should be processed within
24 hours. Specimens in transport medium refrigerated at 4° C should be
processed within 48 hours. If a stool specimen is not to be processed within
48 hours of the time it is collected, it should be frozen immediately at -70°C.
If a specimen is to be collected by rectal swab, the swab
sticks should be coated with feces and then placed into transport medium so
the swabs are completely covered by the medium. The top portion of the swabs
should be broken off and discarded. Swabs in a transport medium should be
processed within 24 hours at room temperature or within 48 hours if refrigerated
at 4oC. Swabs not to be processed within 48 hours of collection should be
immediately frozen at -70oC. Do not process dry swabs.
Specimens should not be refrigerated for days and then
frozen, nor placed in transport medium and left at room temperature for more
than 24 hours. If a specimen is more than 3 hours old at room temperature
and not in a transport system, request re-collection. If a specimen is delayed
for more than 3 days at 4oC in a transport system, request re-collection.
See Table 1 for specimen collection and transport guidelines.
Plating Media for Primary Isolation E. coli O157:H7
strains rapidly ferment lactose and therefore are impossible to differentiate
from normal lactose-fermenting organisms recovered from primary isolation
stool culture media which contain lactose, such as MacConkey or EMB. Most
strains of E. coli O157 in the United States, however, do not ferment
the carbohydrate sorbitol overnight, in contrast to the approximately 90%
of other E. coli strains that ferment sorbitol rapidly. Therefore,
the use of a medium containing sortibol instead of lactose provides a way
to differentiate E. coli O157 from most other strains of E. coli.
The medium most commonly employed to recover E. coli
O157:H7 from stool specimens is Sorbitol-MacConkey Agar (SMAC). On this
medium, the colorless colonies of sorbitol non-fermenting E. coli O157:H7
can be differentiated from the sorbitol fermenters, which are pink after the
specimen is incubated for 18-24 hours at 35-37 oC. Be aware, however, that
as with most issues concerning microbiology, there are exceptions to the rule.
Other organisms that are not E. coli O157 can also produce colorless
colonies on Sorbitol-MacConkey agar. In an attempt to get around this issue,
there are modifications available to Sorbitol-MacConkey agar to improve the
isolation and rapid identification of E. coli O157:H7.
One such modification to Sorbitol-MacConkey agar (SMAC)
is the addition of 4-methylumbelliferyl-beta-D-glucuronide (MUG) to help rapidly
identify E. coli O157:H7. The Sorbitol-MacConkey agar with MUG is
incubated overnight and then evaluated for fluorescence. E. coli
O157:H7 is MUG negative, therefore does not produce fluorescence. Non-fluorescent
colonies can then be further tested with antisera or latex-based antiserum
specific for E. coli O157. The MUG test will be described further
in the biochemical identification section.
Another modification uses the addition of cefixime and
tellurite to Sorbitol-MacConkey agar. These compounds are inhibitory for most
other potentially contaminating organisms and permit the isolation of E.
coli O157:H7. Cefixime-tellurite SMAC agar is most commonly used for
culture of animal and food specimens, but it also is used for culture of human
specimens. It has been reported, however, that a few O157 STEC strains fail
to grow on cefixime-tellurite SMAC (4). Other supplements and/or antibiotics
are often added to media in the food industry or public health laboratories
to rapidly recover and identify this organism, but are not discussed in this
course.
Another medium formulated to improve the rate of isolation
and the rapid detection of E. coli O157:H7 from patients is CHRS.OM
O157 agar. CHRS.OM O157 medium contains chromogenic substrates. Organisms
using these substrates produce specific colors to allow identification. For
example, colonies of E. coli O157 produce a mauve color, thus allowing
presumptive identification directly from the primary isolation plates. Bacteria
other than E. coli O157 appear as blue-green or colorless colonies.
See Table 2 for a partial list of media
for the isolation and identification of E. coli O157:H7. For quality
control (QC) an organism that is negative for sorbitol fermentation is E.
coli ATCC (American Type Culture Collection) 35150 or ATCC 43894. These two
ATCC strains also produce Shiga-like toxin Slt 1 and Slt 2.
Biochemical Identification Biochemical identification
of presumptive E. coli O157 STEC isolates is necessary to rule out
other organisms that may be recovered from primary media, or that may cross-react
with O157 antiserum or latex reagents. Some of the organisms which may serologically
cross-react include some Salmonella O group N, Yersinia enterocolitica
serotype 09, Citrobacter freundii, and E. hermannii.
One rapid and easy test that can be used to help identify
E. coliO157:H7 is the MUG test. About 97% of E. coli strains
possess the enzyme beta-glucuronidase. However, verotoxin-producing E.
coli strains, such as E. coli O157:H7, are among the few E.
coli strains that do not have this enzyme and lack the ability to hydrolyze
4-methylumbelliferyl-beta-D-glucuronide (MUG).
If an organism possesses beta-glucuronidase, the enzyme
hydrolyzes the substrate, 4-methylumbelliferyl-beta-D-glucuronide, releasing
4-methylumbelliferone, which fluoresces blue under long-wave UV light. The
MUG reaction, used in conjunction with sorbitol fermentation and agglutination
in E. coli O157 antiserum, is a useful and quick screening test for
toxigenic strains of E. coli O157 from human specimens. The laboratory
can test E. coli for MUG using broth or agar medium containing the
substrate 4-methylumbelliferyl-beta-D-glucuronide.
If the isolate is MUG negative, non-sorbitol fermenting,
and is positive with E. coli O157 antisera or latex agglutination
reagents, use a conventional commercial identification system or kit to complete
the identification and confirmation of the isolate.
E. coli Serotyping The serologic classification
of E. coli O157:H7 is established by the presence of two different
antigens, one somatic and one flagellar. Serologic testing determines 1) whether
the E. coli in question possesses a specific somatic O antigen—that
of O157, and 2) whether the E. coli in question possesses a specific
flagellar H antigen—that of H7. Determination of the O and H serotypes
of E. coli strains is important as markers of pathogenicity and for
epidemiologic outbreak investigations.
Colonies may be tested with antisera and latex reagents
directly from the SMAC plate, or subcultured to another nonselective medium
(blood agar) and tested the next day. A variety of manufacturers produce reagents
to detect either the O157 somatic antigen or the H7 flagellar antigen. See
Table 3 for a partial list of suppliers of serological reagents
for E. coli O157:H7. Some kits allow testing directly from the stool
sample or from individual colonies. Read the manufacturer’s instructions
carefully. If colonies are tested directly from the SMAC medium, it is recommended
that O157 positive colonies should also be transferred to another nonselective
medium (blood agar) for subsequent testing and identification. Although it
is more labor intensive and delays results by a day, subculturing to another
medium provides more bacterial growth on which to perform the O157 agglutination
assay. The extra growth may make it easier to observe agglutination.
If the O157 latex reagent is used, it is important to
test positive colonies with the latex control reagent to rule out nonspecific
reactions according to the procedures recommended by the manufacturer. The
manufacturers of these kits recommend that isolates reacting with both the
antigen-specific and control latex reagents be heated and retested. There
are also commercially available latex reagents and antisera for detecting
certain other non-O157 STEC serotypes.
Isolates agglutinating in O157 antiserum or O157 latex
reagent need to be further characterized biochemically before being identified
as E. coli because strains of several other species can also cross-react
with O157 antiserum or latex reagents.
Specimens from which sorbitol-negative colonies have been
isolated which agglutinate in O157 antiserum or latex reagent, and that have
been biochemically identified as E. coli, may be reported as presumptively
positive for E. coli O157.
Final serologic confirmation of E. coli O157:H7
requires identification of the H7 flagellar antigen. You can either perform
H7 antigen testing in your clinical laboratory or send the isolate to a reference
laboratory or the County Health Department for confirmation and reporting
purposes. Although H7 specific antisera and latex reagents are commercially
available, detection of the H7 flagellar antigen may be difficult. Often isolates
require multiple passages before the flagellar antigen is detected. Flagellar
antigen detection may not be practical or cost-effective for the average clinical
microbiology laboratory, in which case isolates should be sent to a reference
or county health department laboratory for confirmation. In clinical laboratories
that do their own H7 testing, E. coli O157 strains that appear to
be H7 negative should be sent to a reference or county health department laboratory
for confirmation and/or to detect the production of Shiga toxins.
Toxin Detection There are several methods available for
clinical laboratories to detect Shiga-toxin or verotoxin. These include commercial
immunologic kits (EIA and passive latex agglutination methods), optical immunoassay
procedures, cell culture techniques, and the detection of Shiga-toxin or a
specific gene sequence by PCR. Cell culture and PCR techniques will not be
discussed in this course.
Commercial kits can be used to detect toxins directly
in the stool samples, in broth-enhanced stool cultures, or from colony sweeps
of confirmed isolates. A direct assay for the Shiga-toxin in stools can detect
the presence of toxin from other Shiga-toxin strains of E. coli or
confirm that an E. coli O157 strain is a toxin producer. Many of
the commercial kits detect Shiga-toxin from both O157 and non-O157 E. coli
Shiga-toxin producing strains.
Commercial immunoassays for the detection of verotoxin
or Stx 1 and Stx 2 consist of three major methods: EIAs (enzyme immunoassays),
optical immunoassays, and latex agglutination. EIA results can be read either
visually or spectrophotometrically. Published reports of testing the toxin
detection immunoassays indicate sensitivity in the range of 82 to 100% and
specificity in the range of 99 to 100%. These reported sensitivities are significantly
better than reported isolation rates on Sorbitol-MacConkey medium. All three
commercial types of assays (EIA, optical, or latex) have better sensitivity
and specificity when testing is performed on broth-enhanced cultures as opposed
to direct stool samples. Clearly, the major advantage of these assays is improved
detection of E. coli O157:H7 and of non-O157 serotypes. Several different
commercial assays for these toxins are being marketed, so make sure you read
the package insert carefully to determine exactly which toxin(s) the kit is
detecting. See Table 4 for a partial list of suppliers of
kits for the detection of toxin production.
Some contend that performing Shiga-toxin assay for all
EHEC serotypes is better than sorbitol MacConkey culture for E. coli O157:H7
only. The advantage of using a method that detects toxin responsible for disease
is that theoretically all serotypes associated with hemorrhagic colitis and
HUS could readily be detected. Other strains may be involved in hemolytic
colitis and HUS that we are not aware of, so some suggest it is best to screen
all stools for Shiga-toxin. The issues, of course, are time and money. One
disadvantage of Shiga-toxin assay procedures is cost. Commercial kits for
the detection of toxins are several times more expensive than culture-based
screening.
It is recommended, however, that laboratories that perform
Shiga-toxin assay in place of routine culture of E. coli O157:H7
attempt to isolate the organism on SMAC and perform serotype testing when
the specimen is positive for toxin production, both for public health purposes
and for further testing.
Laboratory Protocol A good laboratory protocol for identifying
E. coli O157:H7 would be as follows: Screen SMAC plates for E.
coli O157:H7 at 18-24 hrs. of incubation. Test sorbitol-negative colonies
(transparent or colorless) using E. coli O157 antisera or latex reagent.
Alternatively, pick sorbitol negative colonies and subculture to blood agar
(BAP) for further testing. After 24 hrs. of incubation, perform MUG spot test.
If isolate is MUG negative, screen using the E. coli O157 latex agglutination
kit. If organism agglutinates, confirm as E. coli biochemically by
system or kit identification. For toxin testing and/or H7 flagellar antigen
confirmation, submit the isolate to the health department or reference laboratory.
The decision to test food, water, or environmental samples is best handled
by the Public Health Department.
Other E. coli O157:H7 Identification Methods
A number of molecular techniques and recombinant DNA methods involving analysis
of microbial nucleic acids have become a component of disease surveillance
and outbreak investigation used by public health laboratories and in the food
industry. The use of DNA fingerprint techniques such as pulsed field gel electrophoresis
(PFGE) has permitted subtyping of E. coli strains to determine similarity
of isolates in outbreaks. The specifics of PFGE will not be discussed in this
course.
It is important to note, however, that PFGE technology
has made it easier to detect outbreaks and determine the source of outbreaks.
A molecular subtyping network, PulseNet, developed in 1993, allows state laboratories
and the CDC to compare strains of E. coli O157:H7 to detect widespread
outbreaks. The CDC developed standardized PFGE (DNA fingerprinting) methods
and collaborated with the Association of Public Health Laboratories to create
PulseNet so that scientists at public health laboratories throughout the country
can rapidly compare the PFGE patterns of bacteria isolated from ill persons
and from suspected food to determine whether they are similar. Once these
PFGE patterns are generated, they are entered into an electronic database
of DNA fingerprints at the state, local, or federal laboratories. The patterns
are then uploaded to the national database located at CDC and analyzed. PulseNet
plays a vital role in surveillance for and the investigation of foodborne
illness outbreaks, allowing scientists to identify outbreaks and their causes
in a matter of hours rather than days. Another particular advantage to PulseNet
is that all training, QC, methods and standards are the same, permitting direct
comparison and analysis of data.
H. CURRENT DETECTION AND IDENTIFICATION ISSUES
The American Society for Clinical Pathology (ASCP) performed
a study in 2005 to assess whether a nationwide proficiency testing program
can evaluate laboratories’ ability to detect and identify E. coli
O157:H7. Of the 240 clinical laboratories surveyed by ASCP, only 128 (53%)
correctly identified organisms from the proficiency sample as E. coli
O157:H7, and 66 labs (27%) incorrectly reported “no stool pathogens
isolated,” although the testing instructions said to screen for E.
coli O157:H7. Eight labs (3%) erroneously identified the organism as
E. coli not O157:H7. 57% of the respondents said yes to the question
“Does your laboratory include screening for E. coli O157:H7”;
43% answered no. 52% of the reporting laboratories used Sorbitol-MacConkey
when it was indicated, but only 16% of laboratories had the capability of
performing some type of serotyping. Therefore, the CDC believes that E.
coli is misdiagnosed and underreported. The CDC currently estimates that
more than 50% of clinical laboratories that perform stool cultures do not
routinely test for E. coli O157:H7. Recommendations from the CDC
are that clinical laboratories should review and update their lab practices
in 3 areas: 1) policies regarding which stool specimens to screen for E.
coli O157:H7 and other STEC strains; 2) procedures for isolating and
identifying these organisms; and 3) mechanisms for informing physicians about
stool culture practices.
Informing physicians about stool culture practices is
crucial to ensure detection of E. coli O157. Many surveys (1,2) comparing
physicians’ beliefs about laboratory stool culture practices to actual
practices reported by the laboratories showed that most physicians either
did not know their laboratory’s stool culture protocol or mistakenly
assumed the laboratory routinely screened all specimens for E. coli
O157 strains. As a result of this misunderstanding, many specimens from patients
with bloody diarrhea were not screened for E. coli O157. To avoid
confusion, the laboratory report should explicitly state the organisms for
which the stool was examined.
The two most common reasons given for not routinely screening
specimens for E. coli O157 are that the local incidence is too low
or that the cost of screening is too high. The perception that the local incidence
of E. coli O157 is low may well be false because surveys have consistently
shown a greater incidence of E. coli O157 in areas of the country
that routinely look for this organism. Although the cost of screening does
add to the cost of performing a stool culture, this expense must be weighed
against the expense of failing to correctly diagnose this infection. Patients
infected with E. coli O157 have undergone unnecessary exploratory
surgeries, colonoscopies, barium enemas and appendectomies. Also, failure
to quickly diagnose this infection could make it more difficult and costly
to manage an outbreak associated with contaminated food or water.
I. GUIDELINES FOR LABORATORIES TO DETECT E. COLI O157:H7
The issue of which stool specimens to screen for E.
coli O157 strains has been controversial, but the current recommendation
is to screen all stool specimens submitted for culture, particularly on patients
with symptoms of HUS and those who have bloody diarrhea or have a history
of blood diarrhea. The practice of screening only bloody stools is problematic
because the determination of whether diarrhea is bloody cannot always be made
by directly examining the specimen and therefore is not a useful indicator.
Sometimes blood occurs in the stool later in the infectious process after
the stool culture has already been collected and submitted to the laboratory.
The practice of screening only upon physician request is also insufficient
because many physicians erroneously believe the laboratory routinely screens
for E. coli O157 and therefore often do not specifically request
screening. Physicians may not have been able to obtain an adequate history
of a patient with E. coli O157:H7 infection, and therefore would
not be inclined or suspicious enough to specifically request isolation for
this organism.
To screen for E. coli O157:H7, laboratories should
routinely plate stool specimens on Sorbitol-MacConkey agar (SMAC) and examine
for growth of non-sorbitol-fermenting colonies. Non sorbitol-fermenting colonies
should then be tested further, either on site or at a state or reference laboratory.
Confirmation that a non-sorbitol-fermenting organism is a strain of E.
coli O157 requires 2 steps: detection of the O157 antigen with O157 antiserum
or latex reagents, and biochemical confirmation that the organism is E.
coli. Definitive identification as E. coli O157:H7 requires
further testing for the H7 antigen; most laboratories use a reference laboratory
or county health department laboratory for this step.
Several methods including latex agglutination, optical
immunoassay, and enzyme immunoassay are available to directly detect Shiga-toxins
in stool specimens. Testing stool specimens for the presence of Shiga-toxins
in children should be considered as a method to screen for all STEC strains,
if resources permit.
Reporting Report sorbitol-negative colonies which show
positive agglutination with O157 latex test reagent that also have been identified
biochemically as E. coli as “E. coli serotype O157.”
If tested for toxin, report as “E. coli O157, toxin producer.”
A presumptive diagnosis of an O157 STEC (isolate positive for O157 antigen)
or a non-O157 STEC (isolate positive for Shiga-toxin) infection should be
reported to the clinician as soon as the laboratory obtains this result. Cases
of STEC should be reported to public health authorities. STEC isolates should
be forwarded to a local or state public health laboratory for serotyping and/or
molecular subtyping.
J. TREATMENT
Antibiotics should not be used to treat E. coli
O157:H7 infection. Most people recover without antibiotics or other specific
treatment within 5 to 10 days. There is no evidence that antibiotics improve
the course of disease, and it is thought that treatment with some antibiotics
could lead to kidney and/or further complications. Studies have shown (1,5,6)
that treating with antibiotics may increase the risk of developing HUS and
decrease the chance of recovery of E. coli O157:H7. Patients with
hemolytic uremic syndrome are generally not treated with antibiotics.
K. HOW TO AVOID OR PREVENT INFECTIONS
Cattle and other animals are the principal source of E.
coli O157 infection; they carry E. coli O157 normally in their
intestines. Changes in the preparation of animals for slaughter and in slaughter
and processing methods can decrease the contamination of carcasses with E.
coli O157 and the subsequent contamination of meat. Cattle manure is
an important source of E. coli O157. Manure can accidentally contaminate
the environment, including streams that flow through produce fields or water
used for irrigation, pesticide application, or washing. Food, particularly
food consumed raw, such as vegetables and fruit, should be kept away from
animal feces during growth, harvest and processing. Collaborative efforts
are needed to decrease environmental contamination and improve the safety
of produce.
The Centers for Disease Control (CDC) (2) has published
a list of recommendations consumers can employ to prevent E. coli
O157:H7 infection. Table 5 is a partial list of recommendations
from the CDC on methods to prevent E. coli O157:H7 infection. In
brief, these recommendations including the following:
REFERENCES
1. American Gastroenterological Association. Consensus Conference Statement.
Escherichia coli O157:H7 infections—an emerging national health
crisis, July 11-13, 1994. Gastroenterology. 1995;108:1923-1934.
2. Centers for Disease Control and Prevention, Department of Health and Human
Services. 2006. Foodborne Illness. www.cdc.gov/diseaseinfor/foodborneinfections.htm.
3. Isenberg H. (ed). Clinical Microbiology Procedures Handbook. ASM Press,
American Society for Microbiology. Washington, DC. 2004.
4. Murray PR, Baron EJ, Jorgensen JH, Pfaller MA, Yolken RH. Manual of Clinical
Microbiology. 8th ed. ASM Press, American Society for Microbiology. Washington,
DC. 2003.
5. Slutsker L, Ries AA, Greene KD, Wells JG, Hutwagner L, Griffin PM. Escherichia
coli O157:H7 diarrhea in the United States: clinical and epidemiological
features. Ann. Intern. Med. 1997;126:505-513.
6. Tarr PI. Escherichia coli O0157:H7: Clinical, diagnostic, and epidemiological
aspects of human infection. Clin. Infect Dis. 1995;20:1-10.
TABLES
Table 1 – Specimen Collection
Guidelines |
||
| Specimen | Container/Conditions | Timing and Transport |
| Fresh stool | 1. Use a clean, dry, wide-mouth, leak-proof container, or use
a stool transport system with a tight-fitting lid. 2. Bag and seal the transported specimen. 3. Submit stool in transport medium if it will not be processed within 2 hrs of collection. 4. Cary-Blair transport medium may be best. |
1. Ideally, process stool specimens as soon as they are
received in the laboratory. 2. If whole stool specimens will not be processed immediately (1hr room temperature), refrigerate at 4° C or freeze at -70° C. Refrigerated samples should be examined within 1-2 hrs, or placed in transport system. (See Note below.) 3. Specimens in transport systems (room temperature) should be processed within 24 hrs. 4. Specimens in transport systems (refrigerated) should be processed within 48 hrs. (See Note below.) 5. If testing is to be done after 48 hrs, store sample frozen at -70° C. 6. Specimens should not be refrigerated for days and then frozen, nor placed in transport medium and left at room temperature for more than 24 hrs. |
| 1. Collect as much stool sample as possible. 2. Patient should pass liquid or bloody stool into a clean dry container, unmixed with urine. 3. Submit specimen during the acute stage of infection (within 6 days of onset of symptoms). |
||
| Rectal Swab | 1. Cary-Blair transport medium may be best. 2. Break off top portion of swabs sticks and discard. 3. A swab should be completely covered by the transport medium. Do not process dry swabs. |
1. Swab transport system, process within 24
hrs at room temperature or within 48 hrs if refrigerated at 4°C. 2. If swabs in transport system are not to be processed within 2 days, freeze at -70° C |
| 1. Place in appropriate transport medium. 2. Submit specimen during the acute stage of infection (within 6 days of onset of symptoms). |
||
Table 2 – Media for Isolation
and ID |
|
| Prepared Media | Purpose |
| Sorbitol-MacConkey agar (SMAC) | Sorbitol is used instead of lactose in MacConkey agar because E. coli O157:H7 does not ferment sorbitol, producing colorless colonies. 93% of other E. coli strains ferment sorbitol, producing pink colonies. |
| Sorbitol-MacConkey with cefixime and tellurite | Cefixime and tellurite inhibit most contaminating organisms, providing better selection of E. coli O157:H7. |
| Sorbitol-MacConkey with MUG | Addition of MUG provides faster presumptive ID of E. coli O157:H7. 97% of E. coli have beta-glucuronidase enzyme, but not E. coli O157:H7. Therefore, E. coli O157:H7 is MUG negative. |
| CHROM agar for E. coli O157 | Organisms utilize chromogenic substrates in the medium to produce specific colors. E. coli O157:H7 produces a mauve color; other organisms appear as blue-green or colorless. |
Table 3 – Serological
Testing Suppliers (for confirmation of E. coli O157:H7) |
||
| Purpose | Supplier or Manufacturer | |
| Latex Reagents | ||
| O157 latex reagents | Latex agglutination test for confirmation of E. coli O157 | -Hardy Diagnostics, www.hardydiagnostics.com |
| H7 latex reagents | Latex agglutination for H7 flagellar antigen of E. coli O157:H7 | -Hardy Diagnostics, www.hardydiagnostics.com -Oxoid, www.oxoid.com -Pro-Lab Inc., www.pro-lab.com -Remel, www.remelinc.com -others |
| Antisera Reagents | ||
| E. coli O157 antisera | Serum containing antibodies for serological confirmation of E. coli O157:H7 | -Denka-Sieken, www.denka-sieken.co.jp -Difco (Division of BD Diagnostic Systems), www.bd.com -Hardy Diagnostics, www.hardydiagnostics.com -Remel, www.remelinc.com -others |
| E. coli O antisera | Serum containing antibodies for serological confirmation of O somatic antigen of E. coli O157 | -Difco (Division of BD Diagnostic Systems), www.bd.com -Hardy Diagnostics, www.hardydiagnostics.com Oxoid, www.oxoid.com Remel, www.remelinc.com -others |
| E. coli H7 antisera | Serum containing antibodies for serological confirmation of H7 flagellar antigen of E. coli O157:H7 | -Denka-Sieken, www.denka-sieken.co.jp -Difco (Division of BD Diagnostic Systems), www.bd.com -Hardy Diagnostics, www.hardydiagnostics.com -Oxoid, www.oxoid.com -Remel, www.remelinc.com others |
| Table 4 – Toxin Production Kits | ||
| Toxin Assay Kit | Purpose | Supplier or Manufacturer |
| Biostar OIA Shigatox | Optical immunoassay test for the detection of Shiga toxins Stx1 and
Stx2 from E. coli. Test can be used directly from stool, broth cultures, and individual colonies. |
Inverness Medical-BioStar Inc., www.invernessmedicalpd.com |
| ImmunoCard Stat | E. coli O157 Plus Rapid immunoassay (EIA) for detecting E. coliO157:H7 Shiga toxin antigen directly from stool or individual colonies. | Meridian Bioscience, Inc., www.meridianbiosciences.com Hardy Diagnostics, www.hardydiagnostics.com |
| Premier EHEC Microwell EIA | ELISA for detection of Shiga toxins in stool, broth or from individual colonies. | Meridian Bioscience, Inc., www.meridianbiosciences.com Hardy Diagnostics, www.hardydiagnostics.com |
| ProSpect T Shiga Toxin (STEC) | Microplate immunoassay detects E. coli Shiga toxin 1 and 2 from isolated colonies, directly from stool or from Cary-Blair transport. | Hardy Diagnostics, www.hardydiagnostics.com Oxoid, www.oxoid.com Remel, www.remelinc.com |
| VTEC-RPLA Oxoid | Latex agglutination for detection of verocytoxins VT1 and VT2. Reverse passive latex agglutination from food, fecal samples or from individual colonies. |
Hardy Diagnostics, www.hardydiagnostics.com Oxoid, www.oxoid.com Remel, www.remelinc.com |
| VTEC-RPLA Seiken | Reverse passive latex agglutination for Shiga toxin from individual
colonies, from stool or Cary-Blair. Differentiates between SLT1, SLT2, and SLT1/SLT2 producers. |
Denka-Seiken, www.denka-sieken.co.jp Hardy Diagnostics, www.hardydiagnostics.com |
Table 5 – Guidelines to Prevent Infection |
| 1. Cook all ground beef and hamburger thoroughly to an internal temperature
of 155°F. Do not eat ground beef patties that are still pink in the middle. |
| 2. Avoid spreading harmful bacteria in your kitchen. Keep raw meat separate
from ready-to-eat foods. Wash hands, counters, and utensils with hot soapy water after they touch raw meat. |
| 3. Wash hands, cutting board, counter, dishes, and knives after they touch meat, spinach, greens, or sprouts. |
| 4. Drink only pasteurized milk, juice, or cider. |
| 5. Wash fruits and vegetables thoroughly under running water, especially those that will not be cooked. |
| 6. Make sure that persons with diarrhea, especially children, wash their
hands carefully with soap after bowel movements to reduce the risk of spreading the organisms. |
| 7. People with a diarrheal illness should avoid swimming in public pools
or lakes, sharing baths with others, and preparing food for others. |